AFAICS the licensing of the Qt Wayland QPA plugin is unchanged, it is simply moved into the Qt Base source tree, technically.
Actually, I am convinced that the Qt company chooses their licensing (i.e. available licenses, specifically Qt components which are dual licensed (i.e. at each direct licensee’s choice) either *GPL3 or proprietary) for the various Qt components very skilled, both legally and by the practical effects the specific licensing for a Qt component achieves. As their success (revenue, company growth etc.) proves them right, I do not believe they have any reason to deviate from their established licensing schemes.